BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016E11SP1|AL427032
(916 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig131 1024 0.0
>3x_Contig131
Length = 998
Score = 1024 bits (516), Expect = 0.0
Identities = 535/540 (99%), Gaps = 1/540 (0%)
Strand = Plus / Plus
Query: 1 atctctgtttcaacagctcttgcattcattggttctttcggtccaatctatatctttgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 atctctgtttcaacagctcttgcattcattggttctttcggtccaatctatatctttgga 434
Query: 61 ggatacaagaacttagtgcaatcaatgcacaggatttttccatttgccaggggtatcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ggatacaagaacttagtgcaatcaatgcacaggatttttccatttgccaggggtatcttt 494
Query: 121 gaagataaagttgcgaatttttggtgcgtttctaatattttcatcaaatatagaaatcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gaagataaagttgcgaatttttggtgcgtttctaatattttcatcaaatatagaaatcta 554
Query: 181 ttcactcagaaggatcttcaattatactcattactcgcaacagttattgggcttttacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ttcactcagaaggatcttcaattatactcattactcgcaacagttattgggcttttacca 614
Query: 241 tcattcattataacatttttatacccgaagagacatttactaccatatgctttggccgca 300
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tcattcattatcaaatttttatacccgaagagacatttactaccatatgctttggccgca 674
Query: 301 tgttcgatgtcattcttcttattcagcttccaggttcatgaaaagacaatcttattacct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tgttcgatgtcattcttcttattcagcttccaggttcatgaaaagacaatcttattacct 734
Query: 361 ttacttcctattacactcttgtacacgtcaagagattggaatgttctatcattggtttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 ttacttcctattacactcttgtacacgtcaagagattggaatgttctatcattggtttgt 794
Query: 421 tggattaacaacgtgg-cattgtttacactctggccattactgaaaaaggacaatctagt 479
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 tggattaacaacgtggacattgtttacactctggccattactgaaaaaggacaatctagt 854
Query: 480 attgcaatatggagtcatgttcatgtttagcaattggttgatcggtaacttcagtttcgt 539
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 855 attgccatatggagtcatgttcatgtttagcaattggttgataggtaacttcagtttcgt 914
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6985
Number of Sequences: 1807
Number of extensions: 6985
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 916
length of database: 10,358,551
effective HSP length: 16
effective length of query: 900
effective length of database: 10,329,639
effective search space: 9296675100
effective search space used: 9296675100
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)